Yah, it's pretty weird that everything else works (damage resistance, weight, range, etc.) but damage simply doesn't...I've tried going one-on-one with my ships, me controlling both, and it simply doesn't cause extra damage whether I change it to 150% or 400%.
File length could be a possibility...I added someone else's multiple PD mounts and such (sorry, don't remember who ATM). However, I took your original compenhancements file and dumped it in there, and it still didn't change the damage...I even retyped the entire entry, but everything else works except damage. *sigh*
Ah well, I guess I'll reinstall when the new patch comes out, and update with your v1.2 mods.

It's always a good thing when the AI can use the mod changes, too...keep up the good work and thanks for the help!
Looking forward to more from ya!
Zen