[raynor]

I name all my transports starting with a small 'a' so I remember to move population around. When I build Stellar Manipulation ships, I name them starting with 'z' so I can find them easily. Other than that, I typically go system by system looking for ships that I haven't moved. The best thing to do, it seems, is just to keep them all in fleets since this cuts down considerably on the ships you have to manage.

Did you know that you can click on the column title above size to sort by size? Then, you can click back on name to sort by size. That helps a little. But it would still be much better if you could sort by all ships with movement remaining. Or, sort by transports, or by colony ships, or ships low on supplies or...