Actually, the reason Intel needs a rework is that after researching Applied Intelligence you now get 4 new techs (only the first 3 of which the AI should care about) - Espionage, Black Ops, Counter Intelligence and Covert Support(Last one not yet finished). These techs need to be researched to get the various projects.
Here are the beta 1.49.31 data files if they might help on AI design.
Data.zip