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Two weirdnesses with communion in this turn. Version 3.00.
Priest who is also a communion master casts more than one "smite" spell per combat round (in the aquatic battle).
and
Mage who is a communion master is unable to cast spells he should be able to. (in the land battle). Note that he is scripted for blade wind but never casts it even though communion should boost him from 1E to 3E.

I suspect that communion is simply not boosting magic level at all in some cases. In others it seems to work as the priest is able to cast Fanaticism when he otherwise couldn't.

These problems occur in the battles involving R'lyeh, ignore the battles with Niefelheim that my scouts watched.